R Tutorial : Simulation and testing with spatstat
Key Takeaways
Introduces simulation and testing with spatstat in R
Original Description
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The spatstat package is the first place to go to for spatial point pattern analysis.
For simplicity everything will be only in two dimensions - but there's no reason why three-dimensional data can't be analysed this way and spatstat does have some functionality for data in 3D. These two dimensions will make a flat plane.
Since spatstat closely implements the published theory of point patterns, you'll need to learn some of the language. First, a "point" is any location in the two-D space. For data on a flat plane this is specified by an X,Y coordinate pair where X and Y can be anything between plus and minus infinity. There might not be anything happening at a point, its just any location in the plane.
An "event", however, is where something is happening - its one of your data points. Sometimes I might call an event a "point" - and most people will do that - but strictly, in the literature, a "point" means any location in the space and an "event" refers to an observed data point.
For example, consider a tree scientist examining the position of trees. Although trees can exist at any point, the locations where the trees actually are, are events.
Most spatial analyses are confined to a finite study area, and this area is called the "window". Events happening outside the window are unobserved.
A "spatial point pattern" is the set of observed events and the window.
A "spatial point process" is a stochastic process. Its like a random number generator for events in a window.
Much of spatial point pattern analysis is spent making inferences about the point process that may have generated a data set. Spatial point processes may be defined over the whole of 2D space, but are only observed in a window. In a forest, the spatial process would depend on the s
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